GST Consultants in Kochi, Kerala

T K Chandy & Associates are GST consultants in Kochi who handle the full GST cycle for Kerala businesses: registration, monthly GSTR-1 and GSTR-3B, input tax credit reconciliation with GSTR-2B and IMS, the GSTR-9/9C annual return (FY 2025-26 due 31 December 2026), e-invoicing, refunds, and replies to notices, appeals and GSTAT.

  • Led by a chartered accountant since 1994
  • Member of SGA World International
  • Kakkanad, Kochi

Reviewed 29 October 2026 by T K Chandy & Associates Audit & Tax Team 12 min read

GST consultants in Kochi: chartered accountant reviewing GST returns and tax invoices

At a glance

GST services at a glance

  1. Who needs registration: Businesses in Kerala with aggregate turnover above ₹40 lakh (goods only) or ₹20 lakh (services), plus anyone making inter-state supplies of goods or selling through e-commerce operators.
  2. Monthly and annual returns: GSTR-1 and GSTR-3B every month or quarter, and the GSTR-9/9C annual return for FY 2025-26 by 31 December 2026.
  3. Input tax credit: Credit is allowed only for invoices that appear in GSTR-2B, so we reconcile your purchase register and act on the Invoice Management System (IMS) every month.
  4. Disputes: Replies to scrutiny notices and show cause notices, first appeals, and appeals to the GST Appellate Tribunal (GSTAT), which accepts e-filing since September 2025.

Goods and Services Tax touches every invoice you raise and every bill you pay. Since GST 2.0 took effect on 22 September 2025, most goods and services fall into two main rates, 5% and 18%, with a 40% rate for luxury and sin goods. The rate structure is simpler, but the compliance is stricter: credit depends on what your suppliers report, returns lock once filed, and the department now issues data-driven notices within months.

As GST consultants in Kochi, the chartered accountants at T K Chandy & Associates in Kakkanad look after GST for traders, manufacturers, exporters, IT and service companies, hospitals, builders and NGOs across Ernakulam and Kerala. We file your returns, reconcile your credit, keep your annual return consistent with your audited accounts, and represent you when the department asks questions. For recent changes, see our note on GST updates for 2026.

GST consultants in Kochi: accountant reconciling GSTR-2B with purchase records

Who we work with

Who Do Our GST Consultants in Kochi Help?

Our GST clients range from first-time registrants to multi-state groups with branches outside Kerala. Each client has a named chartered accountant who reviews the return before it is filed.

  • Traders and distributors in Ernakulam with high purchase volumes and many suppliers
  • Manufacturers with job work, e-way bills and inverted duty refunds
  • Exporters and IT companies in Infopark and the Kochi SEZ, exporting under LUT
  • Builders, hotels and hospitals with mixed taxable and exempt supplies
  • E-commerce sellers who need registration from the first sale
  • Multi-state businesses with a GSTIN in each state and cross-charge or ISD issues
Talk to a GST consultant

What the engagement covers

What Do Our GST Services Include?

GST registration

New registration, amendment, additional place of business, cancellation and revocation, including replies to clarification requests and physical verification.

GSTR-1 and GSTR-3B filing

Monthly or quarterly (QRMP) returns, invoice upload, HSN and document summaries, and tax payment through the electronic ledgers.

ITC reconciliation and IMS

Matching your purchase register with GSTR-2B every month, accepting or rejecting invoices on IMS, and following up with suppliers who have not reported.

Annual return GSTR-9 and 9C

The annual return and the self-certified reconciliation statement, tied back to your audited accounts and tax audit.

E-invoicing and e-way bills

Checking whether e-invoicing applies, setting up IRP reporting within time limits, and e-way bill compliance for goods movement.

GST refunds

Refunds of unutilised credit on exports under LUT, inverted duty structure and excess cash balance, with the supporting statements.

Notices and show cause notices

Replies to scrutiny (ASMT-10), mismatch and audit notices, and show cause notices under section 73, 74 or 74A, with hearings attended.

Appeals and GSTAT

First appeals to the Appellate Authority, pre-deposit planning and appeals to the GST Appellate Tribunal.

GST health check

A review of rates, HSN/SAC codes, reverse charge, credit blocks and past returns to fix errors before the department finds them.

Registration thresholds

When Must a Kerala Business Register for GST?

Kerala is a normal-category state, so the standard thresholds apply. Aggregate turnover is the all-India turnover under one PAN, including exempt supplies and exports.

SituationRegistration needed?
Supplier of goods only, aggregate turnover up to ₹40 lakh, all supplies within KeralaNo
Supplier of goods only, aggregate turnover above ₹40 lakhYes
Supplier of services (or goods and services), aggregate turnover up to ₹20 lakhNo
Supplier of services, aggregate turnover above ₹20 lakhYes
Any inter-state supply of goods, whatever the turnoverYes
Selling goods through an e-commerce operator such as a marketplaceYes, in most cases
Person liable to pay tax under reverse charge, casual or non-resident taxable personYes

The ₹40 lakh limit does not cover certain goods such as ice cream, pan masala and tobacco products. Businesses with turnover up to ₹1.5 crore (goods) or ₹50 lakh (services) can consider the composition scheme; we compare the options with you.

Compliance calendar

What Are the Key GST Due Dates?

The usual dates for a regular taxpayer in Kerala. The portal and CBIC notifications can extend them, so we track each change.

GSTR-1 (monthly)
11th of the following month
GSTR-1 under QRMP (quarterly)
13th of the month after the quarter; optional IFF for B2B invoices in the first two months
GSTR-3B (monthly)
20th of the following month
GSTR-3B under QRMP (Kerala)
22nd of the month after the quarter, with PMT-06 tax payments by the 25th in the first two months
GSTR-9 and GSTR-9C for FY 2025-26
31 December 2026
Claiming ITC for FY 2025-26
Before 30 November 2026 or the filing of the annual return, whichever is earlier
E-invoice reporting (AATO ₹10 crore and above)
Within 30 days of the invoice date

GST 2.0 rates

What Are the GST Rates After GST 2.0?

From 22 September 2025 the four main slabs (5%, 12%, 18%, 28%) were rationalised. We check the rate and HSN code on every product line when we take on a new client.

0% (nil or exempt)

Unbranded staples, fresh produce, health and education services and other notified exemptions

5% (merit rate)

Most essential goods and many items earlier taxed at 12%, plus notified services

18% (standard rate)

Most goods and services, including many items earlier taxed at 28%

40% (special rate)

Luxury and sin goods such as certain high-end vehicles and tobacco-related products

Special rates still apply to gold, silver and precious stones. The 57th GST Council meeting (8 October 2026) made further recommendations that had not been notified when this page was reviewed; we apply changes only once CBIC notifies them.

Our process

How Do Our GST Consultants Work With You Each Month?

  1. Step01

    Onboarding and review

    We review your registration, the last 12 months of returns and your GSTR-2B to find gaps, wrong rates or missed credit before we start filing.

  2. Step02

    Data collection

    You share sales and purchase data from Tally, Zoho or your ERP by an agreed date each month; we chase missing invoices.

  3. Step03

    Reconciliation and IMS

    We match purchases with GSTR-2B, act on IMS (accept, reject or keep pending), and list suppliers whose invoices are missing.

  4. Step04

    Return preparation and approval

    We prepare GSTR-1 and GSTR-3B, send you a summary with the tax payable and credit claimed, and file only after your approval.

  5. Step05

    Year-end and annual return

    At year end we reconcile GST with the books and tax audit, then file GSTR-9 and GSTR-9C by 31 December.

GST consultants in Kochi: client organising sales invoices and purchase bills for monthly GST returns

Be return-ready

What Documents Do We Need for GST Work?

For a new registration, and for monthly filing, these are the records we ask for:

  • PAN and Aadhaar of the proprietor, partners or directors
  • Certificate of incorporation, partnership deed or LLP agreement
  • Proof of principal place of business (rent deed or tax receipt)
  • Electricity bill and NOC from the owner, if rented
  • Bank account details or a cancelled cheque
  • Photographs and authorised signatory letter
  • Sales register and copies of tax invoices
  • Purchase register with supplier GSTINs
  • Credit and debit notes issued and received
  • E-way bills and e-invoices (IRN) for the period
  • Import bills of entry and export shipping bills
  • Expense bills on which GST was charged

ITC reconciliation

Why Does GSTR-2B Reconciliation Matter So Much?

Under section 16(2)(aa) of the CGST Act, you can claim input tax credit only if your supplier has reported the invoice and it appears in your GSTR-2B. The Invoice Management System (IMS) now lets you accept, reject or keep each invoice pending before GSTR-2B is generated, and the credit flows into GSTR-3B on that basis.

In practice, the mismatches come from suppliers who file late, report the wrong GSTIN, or charge IGST instead of CGST and SGST. We reconcile every month, not just at year end, so that missed credit is followed up while the supplier can still correct it. We also watch the other conditions: payment to the supplier within 180 days, blocked credits under section 17(5), and the time limit for claiming credit (30 November after the year end, or the annual return if filed earlier).

Worked example

Example: Recovering Credit for an Ernakulam Distributor

A building-materials distributor in Ernakulam, filing monthly returns, received a notice for excess input tax credit of about ₹6.8 lakh compared with GSTR-2B for one financial year.

  • We reconciled the purchase register with GSTR-2B for all 12 months and found that most of the gap came from two suppliers who had reported invoices under the wrong GSTIN.
  • The suppliers amended their GSTR-1, and the credit appeared in the client's later GSTR-2B statements.
  • A smaller amount related to a supplier whose registration had been cancelled; the client reversed that credit with interest.
  • We filed a reply with the reconciliation, supplier confirmations and payment proof, and attended the hearing.

The proceedings closed with only the admitted reversal and interest paid. The client now gets a monthly supplier mismatch report so the issue does not recur.

Notices and appeals

How Do We Handle GST Notices, Appeals and GSTAT?

Most notices now come from automated return comparisons: GSTR-1 against GSTR-3B, GSTR-3B against GSTR-2B, or GST turnover against your income tax return. A clear, documented reply at the scrutiny stage (ASMT-10) often avoids a show cause notice altogether.

For FY 2024-25 onwards, demands are raised under the single section 74A, with lower penalties where there is no fraud or suppression. If an order goes against you, a first appeal lies to the Appellate Authority within three months, with a pre-deposit of 10% of the disputed tax. A further appeal lies to the GST Appellate Tribunal (GSTAT), which started accepting appeals online from 24 September 2025, with an additional pre-deposit. We draft the grounds, compute the pre-deposit, and represent you at the hearings.

Fees and timing

How Much Do GST Consultants in Kochi Charge?

There is no standard rate card. Our fee depends on the number of GSTINs and states, the volume of invoices and suppliers, whether you file monthly or under QRMP, whether e-invoicing, exports or refunds are involved, and the condition of past returns. Notices and appeals are quoted separately, based on the amount and the issues involved. We agree a fixed fee in writing after reviewing your registration and recent returns. A new registration usually takes a few working days once documents are complete, longer if the officer orders physical verification.

Why T K Chandy & Associates

Why Choose Us as Your GST Consultants in Kochi?

CA-led since 1994

Returns are reviewed by an experienced chartered accountant before filing, not left to software alone.

Based in Kakkanad

Easy to reach from Infopark, the Kochi SEZ and Ernakulam's commercial areas for meetings and document collection.

Monthly reconciliation

GSTR-2B and IMS checked every month, so missed credit is chased while suppliers can still correct it.

GST, audit and income tax together

Your GST figures, audited accounts, tax audit and income tax return agree, which removes the most common notice triggers.

Notice and appeal support

Replies, hearings and appeals handled by the same team that knows your returns.

Confidential handling

Portal credentials and business data handled under ICAI ethics and kept secure.

Related services

Which Other Services Support Your GST Compliance?

Tax audit

Tax audit reports that reconcile with your GST returns and GSTR-9.

Corporate tax

Company tax returns and planning consistent with your GST position.

Get a quote

Talk to our GST consultants in Kochi

Tell us your GSTIN (or that you need registration), monthly invoice volume and any notices received. We will reply with the scope and a fixed fee.

Prefer to talk now? Call +91 484 354 1530 or email [email protected].

Who prepared this page

Written and reviewed by chartered accountants at T K Chandy & Associates

This page is prepared by the audit and tax team at our Kakkanad, Kochi office and checked against the Companies Act, the Income-tax Act, GST law and ICAI standards. It is reviewed whenever the rules change.

  • Last reviewed 29 October 2026
  • Led by T K Chandy Vaidyan, chartered accountant since 1994
  • Member of SGA World International

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Frequently asked questions

GST consultants in Kochi – frequently asked questions

Short answers to the questions clients in Kochi ask us most. Still unsure?

Talk to our team
01.What is the GST registration limit in Kerala?

Kerala follows the normal limits. A business supplying only goods must register when aggregate turnover crosses ₹40 lakh in a financial year; a supplier of services, or of both goods and services, must register above ₹20 lakh. Inter-state suppliers of goods and most e-commerce sellers must register regardless of turnover.

02.How long does GST registration take in Kochi?

If the application is complete and Aadhaar authentication is done, registration is usually granted within about seven working days. If the officer orders physical verification of the premises or raises a clarification, it can take up to 30 days.

03.What is the due date for GSTR-3B for a Kerala taxpayer?

Monthly filers must file GSTR-3B by the 20th of the following month. Quarterly (QRMP) filers in Kerala file by the 22nd of the month after the quarter and pay tax for the first two months through PMT-06 by the 25th.

04.What is the difference between GSTR-1 and GSTR-3B?

GSTR-1 reports your outward supplies invoice by invoice, which feeds your customers' GSTR-2B. GSTR-3B is the summary return in which you declare tax payable, claim input tax credit and pay the net tax.

05.What is the due date for GSTR-9 and GSTR-9C for FY 2025-26?

The annual return GSTR-9 and the reconciliation statement GSTR-9C for FY 2025-26 are due by 31 December 2026. GSTR-9 is optional for taxpayers with aggregate turnover up to ₹2 crore, and GSTR-9C applies above ₹5 crore.

06.Does GSTR-9C still need a CA certificate?

No. Since 2021, GSTR-9C is a self-certified reconciliation statement filed by the taxpayer. Most businesses still have it prepared by their chartered accountant because it must reconcile with the audited accounts.

07.Why is my input tax credit lower than my purchase register?

Usually because some suppliers have not filed GSTR-1, filed late, or used the wrong GSTIN, so the invoices are missing from your GSTR-2B. Credit can be claimed only for invoices in GSTR-2B, so monthly reconciliation and supplier follow-up are essential.

08.What is IMS in GST?

The Invoice Management System lets recipients accept, reject or keep pending each invoice uploaded by suppliers before GSTR-2B is generated. Accepted invoices flow into your credit; rejected ones go back to the supplier for correction.

09.Who must issue e-invoices?

Businesses whose aggregate annual turnover has exceeded ₹5 crore in any financial year since 2017-18 must report B2B invoices to the Invoice Registration Portal. Those with turnover of ₹10 crore or more must report each invoice within 30 days of its date.

10.What are the new GST rates under GST 2.0?

From 22 September 2025, most goods and services are taxed at 5% or 18%, with a 40% rate for luxury and sin goods. The earlier 12% and 28% slabs were largely merged into these rates, while gold and precious stones keep special rates.

11.How do I reply to a GST notice for mismatch between GSTR-1 and GSTR-3B?

Reconcile the two returns for the period, identify whether the gap is a timing difference, an amendment or a genuine short payment, and reply with the reconciliation and supporting invoices within the time given. Any admitted short payment should be paid with interest through DRC-03.

12.What is the time limit to file a GST appeal?

A first appeal to the Appellate Authority must be filed within three months of the order, with a pre-deposit of 10% of the disputed tax. An appeal to the GST Appellate Tribunal must be filed within three months of the first appeal order, with a further pre-deposit.

13.Can I claim a GST refund on exports?

Yes. If you export under a Letter of Undertaking without paying IGST, you can claim a refund of unutilised input tax credit. If you pay IGST on export of goods, the refund is processed through the shipping bill. Refund claims must generally be filed within two years from the relevant date.

14.What happens if I file GSTR-3B late?

Late fee is charged per day of delay, subject to a cap, and interest at 18% a year applies on tax paid late. Continued non-filing can lead to blocking of e-way bills and suspension or cancellation of registration.

15.Can a GST consultant in Kochi handle GST for my branches in other states?

Yes. Each state needs its own GSTIN and returns, but we can file and reconcile all of them centrally from Kochi, including cross-charge and Input Service Distributor (ISD) entries between branches.

References:CBIC – GST · GST portal · GST Council · GST Appellate Tribunal e-filing · E-invoice system — reviewed 29 October 2026